PBC corrections for bilayer membranes
This application implements the model from
Camley, Lerner, Pastor, and Brown,
J. Chem. Phys.
143
, 243113 (2015)
Set viscosities, b to MARTINI values
Set viscosities, b to plausible all-atom values
Water height* H (nm):
System lateral size L (nm):
Membrane viscosity η
m
(Poise cm):
Water viscosity η
f
(Poise):
Hydrodynamic radius R (nm):
Interleaflet coupling b (Poise/cm):
Temperature T (Kelvin):
Compute for single leaflet: peptide, monotopic protein, or lipid
N.B.
All fields required; bad or missing input produces an error message page
*The total height of water in the system is 2H: if the vertical box size is Z nm, and the bilayer thickness is t, then H = (Z-t)/2.
Perform a
Bayesian approach to estimating errors
.
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